Difference between revisions of "Pdf tutorials"
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(Created page with " ==Catalogues and particle picking== * General catalogue {{pdftutorial|catalogue_introduction|link}}. * Introduction to particle picking {{pdftutorial|click_particles|link...") |
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==Classification== | ==Classification== | ||
| − | * Introduction to PCA {{pdftutorial| classification_tutorial |link}} | + | * Introduction to PCA {{pdftutorial|classification_tutorial|link}} |
| − | |||
==Subboxing== | ==Subboxing== | ||
By ''subboxing'' we refer to the extraction and realignment of subunits out of aligned subtmograms. | By ''subboxing'' we refer to the extraction and realignment of subunits out of aligned subtmograms. | ||
| − | * General subboxing {{pdftutorial| subboxing |link}} | + | * General subboxing {{pdftutorial|subboxing|link}} |
* Symmetry and subboxing {{pdftutorial| subboxing_symmetry |link}} | * Symmetry and subboxing {{pdftutorial| subboxing_symmetry |link}} | ||
| − | * Subboxing and classification {{pdftutorial| subboxing_multireference_PCA |link}} | + | * Subboxing and classification {{pdftutorial| subboxing_multireference_PCA|link}} |
==Command line operations== | ==Command line operations== | ||
Revision as of 10:25, 29 April 2016
Contents
Catalogues and particle picking
- General catalogue link.
- Introduction to particle picking link.
- Specific tools for filaments
- Specific tools for freely shaped membranes
- Model combinations link
Classification
- Introduction to PCA link
Subboxing
By subboxing we refer to the extraction and realignment of subunits out of aligned subtmograms.
- General subboxing link
- Symmetry and subboxing subboxing_symmetry .pdf link
- Subboxing and classification subboxing_multireference_PCA.pdf link
Command line operations
commandline .pdf link command_line_projects .pdf link commandline_classification .pdf link Command line operations for general manipulation of tables, for alignment projects or for classification projects.
Msicellaneosu
- Formatting data folders formatting_data .pdf link
- Tools to scan convergence: convergence .pdf link
- Writting customized extensions of Dynamo: database_plugins_guidelines .pdf link multireference_plugins .pdf link
