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- ''Importing models'' refers to the creation of model objects based on coordinates and angles c ...ee that after addition of a model into the tomogram the number of assigned models doesn't change, refresh the GUI pressing the {{t|list volumes}} button.3 KB (419 words) - 10:51, 12 March 2020
- * you want to define precisely and (consequently for all models) the step between two z-levels, or5 KB (792 words) - 11:18, 28 February 2017
- Vesicle models are appropriate when particles are evenly distributed on surfaces reasonabl === From dipole set models ===10 KB (1,585 words) - 10:00, 24 February 2017
- ...vesicle, and using a single <tt>dipole set</tt> model to encompass all the models). Some manipulation [[Vesicle_models#From_dipole_set_models | from the comm7 KB (1,266 words) - 17:20, 24 February 2017
- Linking surfaces with point models is an useful way to get initial orientations of particles. The idea is to a Let's assume you have to models in your workspace: <tt>p</tt> is a general point model, and <tt>s</tt> is a2 KB (266 words) - 14:25, 14 July 2017
- ...t subtomograms from filament-like structures using the ''Dynamo'' filament models. ...tomogram entry appears in the catalogue manager. Any further annotations (models) to the tomogram will be linked to this entry. Select the entry and open it6 KB (1,042 words) - 15:52, 12 August 2021
- ...uctures with large surfaces (e.g., membranes) using the ''Dynamo'' surface models. ...tomogram entry appears in the catalogue manager. Any further annotations (models) to the tomogram will be linked to this entry. Select the entry and open it7 KB (1,174 words) - 09:23, 13 August 2021
- {{t| myCatalogue/volume_2/models/someModel.omd}} {{t| dwrite(myModel,'myCatalogue/volume_2/models/myModel.omd')}}.3 KB (482 words) - 15:54, 23 February 2017
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- ===Adding models from a tomogram===626 bytes (93 words) - 13:21, 1 September 2016
- ...one or models that capture the geometry of the particle distribution. The models will be also kept in the catalogue. ...rite a [[Scripts on sets of models | script]] to visit in one loop all the models and operate on them.2 KB (340 words) - 12:31, 23 February 2017
- The ''model pool'' is the set of models currently hold on MEMORY (and not necessarily on the hard disk). From all the models in the model pool, at any given time only one (or none) is consedered to be1 KB (244 words) - 12:27, 22 March 2016
- === Models ===1 KB (226 words) - 09:24, 1 June 2016
- ''Importing models'' refers to the creation of model objects based on coordinates and angles c ...ee that after addition of a model into the tomogram the number of assigned models doesn't change, refresh the GUI pressing the {{t|list volumes}} button.3 KB (419 words) - 10:51, 12 March 2020
- ...he geometric computations performed on a single model onto a larger set of models. | [[File:modelReuseFilament3Points.png|thumb|upright|400px|three filament models ]]4 KB (574 words) - 05:54, 17 August 2016
- ...include any models visible in the field of view of the rotation frame. The models in the [[model pool]] can be accessed with the same menus also available in [[File:ObliqueViewAuxiliaryModel.png|thumb|center|600px| The models seen in the [[model pool]] of <tt>dtmslice</tt> are also visible here/]]3 KB (423 words) - 16:23, 27 April 2017
- [[Category:Models]] #: Models are naturally integrated inside the [[catalogue]] system, making the proces10 KB (1,574 words) - 10:00, 2 May 2017
- Linking surfaces with point models is an useful way to get initial orientations of particles. The idea is to a Let's assume you have to models in your workspace: <tt>p</tt> is a general point model, and <tt>s</tt> is a2 KB (266 words) - 14:25, 14 July 2017
- ...are used as an easy interface to describe sets of tomograms and attached models. #<nowiki>!</nowiki> Import models from this source6 KB (906 words) - 15:24, 10 April 2020
- {{t| myCatalogue/volume_2/models/someModel.omd}} {{t| dwrite(myModel,'myCatalogue/volume_2/models/myModel.omd')}}.3 KB (482 words) - 15:54, 23 February 2017
- === Loops on models === ...ing [[membrane models]], you frequently use a given series of [[membrane models#Command line| commands]].6 KB (1,039 words) - 16:09, 23 February 2017
- === Command line manipulation of sets of models === ...the approach of saving a ''Model workflow'' and reuse it later on a set of models defined inside the ''Catalogue'' manager <tt>dcm</tt>. This technique may p4 KB (698 words) - 09:30, 1 September 2016
- ...y spherical. If they depart too much from sphericity, you can use membrane models, as done in this walkthrough. == Addition of further models==5 KB (872 words) - 22:03, 20 August 2017
- === Relinking models === ...dcm</tt> with flag <tt> synchronize </tt> tuned to the literal value <tt> models </tt>, i.e.5 KB (855 words) - 21:28, 14 August 2017
- ...allows you to create a catalogue with some small tomograms and predefined models so that you can play with it before using the catalogue on your own data se642 bytes (98 words) - 15:10, 27 April 2016
- ...ogue, and to a particular volume inside the catalogue. This means that the models that are imported, edited and/or saved will be automatically submitted to t ...e as an auxiliary image that is also interactive, allowing the creation of models or the navegation in the tomogram.10 KB (1,696 words) - 14:59, 27 November 2020
- [[Category:Models]] ...d, as membranes or pseudo crystals. The {{t|crop_points}} generated by the models after the geometric computation stage are not supposed to realistically be4 KB (683 words) - 12:51, 3 February 2017
- === From models === Generating tables is the very reason models exist. If you want to generate the table corresponding to a single model {{5 KB (787 words) - 13:49, 23 May 2018
- Vesicle models are appropriate when particles are evenly distributed on surfaces reasonabl === From dipole set models ===10 KB (1,585 words) - 10:00, 24 February 2017
