Difference between revisions of "Workstations EMBO 2016"

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''To be filled soon''!
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In your terminal open a fresh linux shell.
  
 
Once opened a fresh shell, we need to ensure we have a fresh environment:
 
Once opened a fresh shell, we need to ensure we have a fresh environment:
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<tt>export MCR_CACHE_ROOT=~/tmp/</tt>
 
<tt>export MCR_CACHE_ROOT=~/tmp/</tt>
  
 
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Now, you can activate ''Dynamo'' in the linux shell by running:
Now, you can activate ''Dynamo'' in the shell by running:
 
  
 
<tt>source ~/tmp/dynamo_activate_linux_shipped_MCR.sh</tt>
 
<tt>source ~/tmp/dynamo_activate_linux_shipped_MCR.sh</tt>

Revision as of 10:55, 25 August 2016

In your terminal open a fresh linux shell.

Once opened a fresh shell, we need to ensure we have a fresh environment: export PATH=/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/programs/share/bin

Before starting Dynamo, there is another environment variable that we need to tune.

export MCR_CACHE_ROOT=~/tmp/

Now, you can activate Dynamo in the linux shell by running:

source ~/tmp/dynamo_activate_linux_shipped_MCR.sh

This includes in the linux shell the paths that it needs to find both Dynamo and its libraries.

Now, you can just type in the terminal:

dynamo

which should open a standalone console, that can be used to enter Dynamo commands manually.