Walkthrough for lattices on vesicles

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This walkthrough shows the approach to process proteins that cover spheroidal vesicles following (approximately) a structured lattice. For demonstration, we use a highly binned tomogram with several viral capsides.

Data

The data has been made available by Florian Schur . This single tomogram is part of the data set used for the paper:


Getting the data

You can download the data through:

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Viewing the data

The tomogram is severely binned, so it will probably fit in memory without major problems. We can just use our typical tool to quick check a tomogram.

 dtmshow v17.rec 


Particle cropping

We are interested in cropping the particles between the two layers of each one of the viruses.