Walkthrough for lattices on vesicles
This walkthrough shows the approach to process proteins that cover spheroidal vesicles following (approximately) a structured lattice. For demonstration, we use a highly binned tomogram with several viral capsides.
The data has been made available by Florian Schur . This single tomogram is part of the data set used for the paper:
Getting the data
You can download the data through:
Viewing the data
The tomogram is severely binned, so it will probably fit in memory without major problems. We can just use our typical tool to quick check a tomogram.
We are interested in cropping the particles between the two layers of each one of the viruses.