Difference between revisions of "Video tutorials"

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==== Filaments ====
 
==== Filaments ====
 
In [[https://youtu.be/hsZ-9xAYufIt this video link ]] {{t|dtmslice}} is used to pick microtubules in a tomogram. We use {{t|dpreview}} to inspect the tomogram and select an area that is then read into memory.
 
In [[https://youtu.be/hsZ-9xAYufIt this video link ]] {{t|dtmslice}} is used to pick microtubules in a tomogram. We use {{t|dpreview}} to inspect the tomogram and select an area that is then read into memory.
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The tomogram is courtesy of Takashi Ishikawa, in PSI-Villingen (Switzerland).

Revision as of 09:12, 1 June 2016

Starting Guide

This [youtube link] shows an introduction to setting up alignment projects in Dynamo. It works on the old dynamo_project_manager GUI.

Particle picking

Catalogues

Models

Isolated particles

In this [youtube link] We use dtmview to show how the concurrent viewers can be used to pick isolated particles. The tomogram represents a mixture of PRD1 bacteriophages in a buffer.

Tomogram is courtesy of the Abrescia Lab, in CIC-Biogune (Bilbao).

Arbitrary membranes

In [this video] we use dtmslice and the montage viewer to define points in a membrane in a semiautomatic manner. Tomogram is courtesy of Morgan Beeby, in Imperial College (London).

Filaments

In [this video link ] dtmslice is used to pick microtubules in a tomogram. We use dpreview to inspect the tomogram and select an area that is then read into memory. The tomogram is courtesy of Takashi Ishikawa, in PSI-Villingen (Switzerland).