Difference between revisions of "Video tutorials"
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==== Arbitrary membranes ==== | ==== Arbitrary membranes ==== | ||
In [[https://youtu.be/2V1pD0Gr8L8 this video]] we use {{t|dtmslice}} and the {{t|montage viewer}} to define points in a membrane in a semiautomatic manner. | In [[https://youtu.be/2V1pD0Gr8L8 this video]] we use {{t|dtmslice}} and the {{t|montage viewer}} to define points in a membrane in a semiautomatic manner. | ||
| + | Tomogram is courtesy of Morgan Beeby, in Imperial College (London). | ||
==== Filaments ==== | ==== Filaments ==== | ||
In [[https://youtu.be/hsZ-9xAYufIt this video link ]] {{t|dtmslice}} is used to pick microtubules in a tomogram. We use {{t|dpreview}} to inspect the tomogram and select an area that is then read into memory. | In [[https://youtu.be/hsZ-9xAYufIt this video link ]] {{t|dtmslice}} is used to pick microtubules in a tomogram. We use {{t|dpreview}} to inspect the tomogram and select an area that is then read into memory. | ||
Revision as of 10:11, 1 June 2016
Contents
Starting Guide
This [youtube link] shows an introduction to setting up alignment projects in Dynamo. It works on the old dynamo_project_manager GUI.
Particle picking
Catalogues
Models
Isolated particles
In this [youtube link] We use dtmview to show how the concurrent viewers can be used to pick isolated particles. The tomogram represents a mixture of PRD1 bacteriophages in a buffer.
Tomogram is courtesy of the Abrescia Lab, in CIC-Biogune (Bilbao).
Arbitrary membranes
In [this video] we use dtmslice and the montage viewer to define points in a membrane in a semiautomatic manner. Tomogram is courtesy of Morgan Beeby, in Imperial College (London).
Filaments
In [this video link ] dtmslice is used to pick microtubules in a tomogram. We use dpreview to inspect the tomogram and select an area that is then read into memory.
