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  • ...vesicles, pseudo-crystals or freely-shaped membranes. For each different geometry type, ''Dynamo'' provides a different [[Model|model]] class. ...in the catalogue, and would define in them one or models that capture the geometry of the particle distribution. The models will be also kept in the catalogue
    2 KB (340 words) - 12:31, 23 February 2017
  • ...Fourier space covered by the particle. Basically it represents the imaging geometry. ...ds to include a volume file with zeros and ones that describes this custom geometry.
    5 KB (721 words) - 18:41, 8 March 2018
  • Once the initial points that describe the geometry of interest have been introduces, the user can choose for different paramet ...uperclass of type {{t|model}}, and the class will depend on the particular geometry.
    10 KB (1,574 words) - 10:00, 2 May 2017
  • [[Category: Geometry]]
    6 KB (936 words) - 10:01, 5 March 2018
  • ...tore them in a ''single'' model. That's all you need to describe vesicular geometry. Additionally, the <tt>dipoleSet</tt> includes some tools for quickly extra
    19 KB (3,125 words) - 17:32, 29 August 2018
  • ...les [[Walkthrough for lattices on vesicles| from densely packed spherical geometry ]] (~1 hour) <br /> To get the data, please write in the '''linux terminal
    4 KB (538 words) - 08:58, 25 August 2017
  • This code exemplifies the geometry and syntax of different [[Filament model#Types_of_filaments| filament types
    3 KB (325 words) - 15:29, 15 August 2016
  • ...veral z-slices of a tomogram. Through the workflow specific for this model geometry, ''Dynamo'' will create a smooth continuous surface that represents the mem
    5 KB (792 words) - 11:18, 28 February 2017
  • ...atment of [[Walkthrough for lattices on vesicles| densely packed spherical geometry ]] (~1 hour)
    8 KB (1,246 words) - 12:51, 31 August 2017
  • ...s to achieve this. A simple one is to create a model of the membrane/crown geometry, align our average to it (with <tt>dalign</tt>), and use the alignment para ...get a smoother appearance, and also a more accurate representation of the geometry.
    46 KB (7,298 words) - 09:15, 29 August 2019
  • ...les [[Walkthrough for lattices on vesicles| from densely packed spherical geometry on HIV viral capsides]] (~1 hour)
    6 KB (845 words) - 10:55, 7 December 2017
  • ...re considered and a new set of angles to scan is defined around these. The geometry of the new set is defined by the angular parameters of the previous level w would generate this scanning geometry:
    5 KB (786 words) - 09:35, 27 October 2017
  • ...ssed in the coordinates of the 3x binned reconstruction. You can check the geometry with low level depicting commands as <tt>dslice3d</tt> Now we can proceed to transport the locations annotated in the 3x binned geometry into the full size information.
    17 KB (2,770 words) - 10:57, 27 August 2018
  • ...les [[Walkthrough for lattices on vesicles| from densely packed spherical geometry on HIV viral capsides]] (~1 hour)
    13 KB (1,774 words) - 18:58, 26 January 2018
  • ...assume a <tt>ftype</tt> 1 (i.e., column 13 of table will be one). In this geometry, electrons come from the direction z, and the sampled rotated around the 'y
    3 KB (548 words) - 19:07, 3 September 2019
  • ...les [[Walkthrough for lattices on vesicles| from densely packed spherical geometry on HIV viral capsides]] (~1 hour)
    7 KB (984 words) - 13:31, 12 April 2018
  • ...les [[Walkthrough for lattices on vesicles| from densely packed spherical geometry ]] (~1 hour) <br /> To get the data, please write in the '''linux terminal
    4 KB (604 words) - 21:43, 29 August 2018
  • This part is specific to the particular geometry of the proteins of interest.
    7 KB (1,014 words) - 09:27, 22 August 2018
  • ...tices on vesicles]] extraction of particles from densely packed spherical geometry.
    3 KB (397 words) - 08:01, 5 September 2018
  • ...ersions of micrographs. They do not include any 3D model of the projection geometry, and are used internally by ''Dynamo'' to provide an initial track identit
    6 KB (945 words) - 17:06, 6 February 2019

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