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- 15:17, 13 September 2021 diff hist +40 Starters guide (EMBO2021) current
- 11:09, 13 September 2021 diff hist -36 Advanced starters guide (EMBO2021) →Data current
- 11:08, 13 September 2021 diff hist +10 Advanced starters guide (EMBO2021) →Data
- 11:08, 13 September 2021 diff hist +18 Advanced starters guide (EMBO2021)
- 11:07, 13 September 2021 diff hist +57 Advanced starters guide (EMBO2021)
- 13:32, 10 September 2021 diff hist +9 EMBO workshop 2021 →Schedule
- 13:31, 10 September 2021 diff hist +22 EMBO workshop 2021
- 17:25, 7 September 2021 diff hist 0 EMBO workshop 2021 →Data location
- 17:25, 7 September 2021 diff hist +6 EMBO workshop 2021 →Data location
- 16:59, 7 September 2021 diff hist +1 EMBO workshop 2021 →Load and run Dynamo
- 16:48, 7 September 2021 diff hist -5 EMBO workshop 2021 →Load and run Dynamo
- 16:47, 7 September 2021 diff hist +30 EMBO workshop 2021 →Load and run Dynamo
- 16:46, 7 September 2021 diff hist +72 EMBO workshop 2021 →Load and run Dynamo
- 16:44, 7 September 2021 diff hist +19 EMBO workshop 2021 →Load and run Dynamo
- 16:42, 7 September 2021 diff hist -47 Advanced starters guide (EMBO2021) →Subboxing project
- 16:40, 7 September 2021 diff hist +108 Advanced starters guide (EMBO2021) →Project with rotational randomization
- 16:37, 7 September 2021 diff hist 0 Advanced starters guide (EMBO2021) →Creating an average
- 16:36, 7 September 2021 diff hist +8 Advanced starters guide (EMBO2021) →Project to find membrane orientations
- 16:36, 7 September 2021 diff hist +54 Advanced starters guide (EMBO2021) →Project to find membrane orientations
- 16:30, 7 September 2021 diff hist -11 Advanced starters guide (EMBO2021) →Creating an average
- 16:27, 7 September 2021 diff hist -28 Advanced starters guide (EMBO2021) →Creating an average
- 10:56, 7 September 2021 diff hist -257 Advanced starters guide (EMBO2021)
- 10:20, 7 September 2021 diff hist +56 Advanced starters guide (EMBO2021) →Subboxing project
- 10:02, 7 September 2021 diff hist +23 EMBO workshop 2021 →Load and run Dynamo
- 10:00, 7 September 2021 diff hist +9 Advanced starters guide (EMBO2021) →Subboxing project
- 17:07, 6 September 2021 diff hist -55 EMBO workshop 2021
- 17:06, 6 September 2021 diff hist -6,616 Walkthrough on command line based tilt series alignment (EMBO2021) current
- 17:05, 6 September 2021 diff hist +34 EMBO workshop 2021
- 17:02, 6 September 2021 diff hist +292 EMBO workshop 2021 →Load and run Dynamo
- 17:01, 6 September 2021 diff hist -192 EMBO workshop 2021 →Load and run Dynamo
- 17:00, 6 September 2021 diff hist +192 EMBO workshop 2021 →Connect to Guacamole and run Dynamo
- 16:55, 6 September 2021 diff hist -92 Advanced starters guide (EMBO2021) →Subboxing project
- 16:54, 6 September 2021 diff hist -124 Advanced starters guide (EMBO2021) →Pick membrane points
- 16:54, 6 September 2021 diff hist +19 Advanced starters guide (EMBO2021) →Project to find membrane orientations
- 16:53, 6 September 2021 diff hist -124 Advanced starters guide (EMBO2021)
- 16:40, 6 September 2021 diff hist +245 Main Page →Cite
- 16:18, 6 September 2021 diff hist -146 Advanced starters guide (EMBO2021) →Data
- 16:16, 6 September 2021 diff hist -464 Advanced starters guide (EMBO2021)
- 16:13, 6 September 2021 diff hist +11 EMBO workshop 2021
- 16:13, 6 September 2021 diff hist +47,631 N Advanced starters guide (EMBO2021) Created page with "Category:Walkthroughs This walkthrough uses a small size example based on a real tomogram to cover several tasks. == The example data set == The data is a fraction of a..."
- 16:10, 6 September 2021 diff hist +18 Walkthrough on command line based tilt series alignment (EMBO2021) →Basic data
- 16:09, 6 September 2021 diff hist +1 Walkthrough on GUI based tilt series alignment (EMBO2021) →Data current
- 16:08, 6 September 2021 diff hist +2 EMBO workshop 2021 →Schedule
- 16:07, 6 September 2021 diff hist +21,313 N Walkthrough on GUI based tilt series alignment (EMBO2021) Created page with "''Dynamo'' includes a package for automated alignment and reconstruction of tilt series. This walkthrough guides users through a series of steps on how to use it in GUI-based..."
- 16:04, 6 September 2021 diff hist +73 Starters guide (EMBO2021) →Alignment projects
- 15:46, 6 September 2021 diff hist -19 EMBO workshop 2021
- 15:46, 6 September 2021 diff hist -8 EMBO workshop 2021 →Schedule
- 15:45, 6 September 2021 diff hist -162 Starters guide (EMBO2021)
- 15:40, 6 September 2021 diff hist +15,561 N Starters guide (EMBO2021) Created page with "This tutorial shows how to manually pick particles in a tomogram, extract them, align and classify them. This tutorial is a shortened version of the original Starters_guide..."
- 15:39, 6 September 2021 diff hist +91 Starters guide current
- 15:34, 6 September 2021 diff hist +19 EMBO workshop 2021 →Schedule
- 15:33, 6 September 2021 diff hist -100 Walkthrough on command line based tilt series alignment (EMBO2021)
- 15:32, 6 September 2021 diff hist -11 Walkthrough on command line based tilt series alignment (EMBO2021) →Entering the data
- 15:31, 6 September 2021 diff hist 0 N File:AlignCommandLine autocompletionOfUserObjectEMBO2021.png current
- 15:31, 6 September 2021 diff hist +12,584 N Walkthrough on command line based tilt series alignment (EMBO2021) Created page with "Dynamo includes a package for automated alignment and reconstruction of tilt series. This walkthrough guides users through a series of steps on how to use it in command line b..."
- 12:43, 6 September 2021 diff hist 0 m EMBO workshop 2021 →Chimera
- 18:29, 3 September 2021 diff hist -201 EMBO workshop 2021 →Parallel processing
- 18:29, 3 September 2021 diff hist +204 EMBO workshop 2021 →Chimera
- 18:27, 3 September 2021 diff hist +35 Starters guide (workshop version) →Alignment projects current
- 18:21, 3 September 2021 diff hist +82 Starters guide (workshop version) →Alignment projects
- 18:17, 3 September 2021 diff hist +5 Starters guide (workshop version) →Initial reference generation
- 18:17, 3 September 2021 diff hist +4 Starters guide (workshop version) →Initial reference generation
- 18:16, 3 September 2021 diff hist +68 Starters guide (workshop version) →Initial reference generation
- 18:15, 3 September 2021 diff hist +20 Starters guide (workshop version) →An alternate visualization: orthogonal projections
- 18:07, 3 September 2021 diff hist -30 m Starters guide (workshop version) →Viewing tomograms
- 17:48, 3 September 2021 diff hist +42 EMBO workshop 2021 →Chimera
- 17:42, 3 September 2021 diff hist +142 EMBO workshop 2021 →Data location
- 17:41, 3 September 2021 diff hist -7 Advanced starters guide →Creating an average current
- 17:37, 3 September 2021 diff hist -25 Advanced starters guide →Creating an average
- 16:37, 3 September 2021 diff hist +1 m Advanced starters guide →Project for localized alignment
- 13:19, 3 September 2021 diff hist +45 Advanced starters guide →Project to find membrane orientations
- 13:17, 3 September 2021 diff hist +5 Advanced starters guide →Prebinning the tomograms
- 12:27, 3 September 2021 diff hist -1 Advanced starters guide →Downloading
- 15:43, 2 September 2021 diff hist 0 MediaWiki:Sidebar current
- 09:44, 2 September 2021 diff hist -47 EMBO workshop 2021 →Schedule
- 17:12, 1 September 2021 diff hist -9 EMBO workshop 2021 →Schedule
- 16:49, 18 August 2021 diff hist +192 EMBO workshop 2021 →Load and run Dynamo
- 13:19, 18 August 2021 diff hist -120 Walkthrough for lattices on vesicles current
- 13:13, 18 August 2021 diff hist -58 Getting a Structure from Multiple Tomograms of HIV Capsids (walkthrough) current
- 13:11, 18 August 2021 diff hist -125 Walkthrough for template matching current
- 13:08, 18 August 2021 diff hist +24 Advanced starters guide →Subboxing project
- 13:06, 18 August 2021 diff hist +25 Advanced starters guide →Project with rotational randomization
- 13:01, 18 August 2021 diff hist -130 Advanced starters guide →Creating a tight mask
- 13:00, 18 August 2021 diff hist -126 Advanced starters guide →Creating a tight mask
- 12:59, 18 August 2021 diff hist +20 Advanced starters guide →Management of the missing wedge
- 12:58, 18 August 2021 diff hist +23 Advanced starters guide →Defining a subboxed subunit
- 11:58, 18 August 2021 diff hist 0 File:StartersGuideResultsClassification2.png Stefano Scaramuzza uploaded a new version of File:StartersGuideResultsClassification2.png current
- 11:57, 18 August 2021 diff hist +103 Starters guide (workshop version) →Subtomogram classification
- 11:55, 18 August 2021 diff hist 0 N File:StartersGuideResultsClassification2.png
- 11:54, 18 August 2021 diff hist +64 Starters guide (workshop version)
- 11:54, 18 August 2021 diff hist -116 m Starters guide (workshop version) →Subtomogram classification
- 18:06, 17 August 2021 diff hist +4 Starters guide (workshop version) →Initial model generation
- 17:55, 17 August 2021 diff hist +39 EMBO workshop 2021
- 17:51, 17 August 2021 diff hist -55 Starters guide (workshop version) →Subtomogram classification
- 17:12, 17 August 2021 diff hist +28 Starters guide (workshop version)
- 17:12, 17 August 2021 diff hist 0 File:StartersGuideResultsAlignment.png Stefano Scaramuzza uploaded a new version of File:StartersGuideResultsAlignment.png current
- 17:04, 17 August 2021 diff hist -64 Starters guide (workshop version)
- 16:51, 17 August 2021 diff hist -255 Starters guide (workshop version)
- 16:25, 17 August 2021 diff hist 0 File:StartersGuideFigure10.png Stefano Scaramuzza uploaded a new version of File:StartersGuideFigure10.png current
- 16:25, 17 August 2021 diff hist -625 Starters guide (workshop version) →Alignment projects
- 15:51, 17 August 2021 diff hist -60 Starters guide (workshop version)
- 15:46, 17 August 2021 diff hist 0 N File:StartersGuideAli1.png current
- 15:45, 17 August 2021 diff hist +51 Starters guide (workshop version)
- 15:45, 17 August 2021 diff hist -627 Starters guide (workshop version) →Alignment projects
- 15:34, 17 August 2021 diff hist -1 Starters guide (workshop version) →Initial model generation
- 15:34, 17 August 2021 diff hist 0 N File:StartersGuideGallery5.png current
- 15:32, 17 August 2021 diff hist +78 Starters guide (workshop version) →Subtomogram alignment and averaging
- 15:30, 17 August 2021 diff hist 0 N File:StartersGuideGallery4.png current
- 15:27, 17 August 2021 diff hist -297 Starters guide (workshop version) →Subtomogram alignment and averaging
- 15:18, 17 August 2021 diff hist 0 File:StartersGuideGallery3.png Stefano Scaramuzza uploaded a new version of File:StartersGuideGallery3.png current
- 14:17, 17 August 2021 diff hist 0 N File:StartersGuideGallery3.png
- 14:16, 17 August 2021 diff hist +57 Starters guide (workshop version) →Subtomogram alignment and averaging
- 14:15, 17 August 2021 diff hist -57 Starters guide (workshop version) →Selecting particles in dgallery
- 14:12, 17 August 2021 diff hist +2 Starters guide (workshop version) →Manual alignment of particles in dgallery
- 14:10, 17 August 2021 diff hist 0 N File:StartersGuideGallery2.png current
- 14:10, 17 August 2021 diff hist +102 Starters guide (workshop version) →Subtomogram alignment and averaging
- 13:52, 17 August 2021 diff hist -22 Starters guide (workshop version) →Manual alignment of particles in dgallery
- 13:37, 17 August 2021 diff hist +174 Starters guide (workshop version)
- 13:35, 17 August 2021 diff hist 0 N File:StartersGuideGallery.png current
- 13:19, 17 August 2021 diff hist +178 Starters guide (workshop version)
- 12:33, 17 August 2021 diff hist -358 Starters guide (workshop version) →Initial model generation
- 11:50, 13 August 2021 diff hist +44 Starters guide (workshop version) →Subtomogram alignment and averaging
- 11:48, 13 August 2021 diff hist 0 Starters guide (workshop version) →Extracting particles from tomograms
- 11:47, 13 August 2021 diff hist +22 Starters guide (workshop version) →Extracting particles from tomograms
- 11:46, 13 August 2021 diff hist 0 File:StartersGuideCrop.png Stefano Scaramuzza uploaded a new version of File:StartersGuideCrop.png current
- 11:44, 13 August 2021 diff hist 0 File:StartersGuideSelectModels.png Stefano Scaramuzza uploaded a new version of File:StartersGuideSelectModels.png current
- 11:42, 13 August 2021 diff hist 0 N File:StartersGuideParticles.png current
- 11:42, 13 August 2021 diff hist 0 N File:StartersGuideShow.png current
- 11:42, 13 August 2021 diff hist +110 Starters guide (workshop version) →Extracting particles from tomograms
- 11:41, 13 August 2021 diff hist -115 Starters guide (workshop version) →Picking particles in tomograms
- 11:40, 13 August 2021 diff hist -52 Starters guide (workshop version) →Extracting particles from tomograms
- 11:39, 13 August 2021 diff hist +52 Starters guide (workshop version) →Extracting particles from tomograms
- 11:38, 13 August 2021 diff hist 0 N File:StartersGuideCrop.png
- 11:37, 13 August 2021 diff hist 0 N File:StartersGuideSelectModels.png
- 11:37, 13 August 2021 diff hist 0 N File:StartersGuideopenVolumeList.png current
- 11:36, 13 August 2021 diff hist -221 Starters guide (workshop version) →Extracting particles from tomograms
- 11:12, 13 August 2021 diff hist -1 Starters guide (workshop version) →Extracting particles from tomograms
- 11:08, 13 August 2021 diff hist -19 Starters guide (workshop version) →Extracting particles from tomograms
- 11:01, 13 August 2021 diff hist -344 Starters guide (workshop version) →Extracting particles from tomograms
- 10:58, 13 August 2021 diff hist +9 Starters guide (workshop version) →Extracting particles from tomograms
- 10:53, 13 August 2021 diff hist +97 Starters guide (workshop version) →An alternate visualization: orthogonal projections
- 10:50, 13 August 2021 diff hist -6 Starters guide (workshop version) →Picking particles in tomograms
- 10:49, 13 August 2021 diff hist 0 File:StartersGuideFigure6.png Stefano Scaramuzza uploaded a new version of File:StartersGuideFigure6.png current
- 10:48, 13 August 2021 diff hist 0 N File:StartersGuideUpdate.png current
- 10:48, 13 August 2021 diff hist 0 File:StartersGuideFigure4.png Stefano Scaramuzza uploaded a new version of File:StartersGuideFigure4.png current
- 10:42, 13 August 2021 diff hist -1,032 Starters guide (workshop version) →Picking particles in tomograms
- 10:34, 13 August 2021 diff hist 0 N File:StartersTomoSlice.png current
- 10:33, 13 August 2021 diff hist -133 Starters guide (workshop version)
- 10:16, 13 August 2021 diff hist -542 Starters guide (workshop version) →Manual particle picking and Dynamo catalogues
- 09:23, 13 August 2021 diff hist +81 Walkthrough on membrane models →Generate subtomogram coordinates current
- 16:48, 12 August 2021 diff hist -129 Starters guide (workshop version)
- 16:36, 12 August 2021 diff hist +19,333 N Starters guide (workshop version) Created page with "==Particle picking and ''Dynamo'' catalogues== We assume that your tomograms are already generated using external packages (i.e. IMOD, Protomo, Inspect3D, TOM); for this tutor..."
- 16:20, 12 August 2021 diff hist +155 Walkthrough for template matching →Getting the tomogram
- 16:18, 12 August 2021 diff hist -13 m EMBO workshop 2021 →Schedule
- 16:18, 12 August 2021 diff hist +1 m EMBO workshop 2021 →Schedule
- 16:18, 12 August 2021 diff hist -17 EMBO workshop 2021 →Schedule
- 16:13, 12 August 2021 diff hist +1 Walkthrough on membrane models
- 16:11, 12 August 2021 diff hist -3 Walkthrough on membrane models
- 15:59, 12 August 2021 diff hist +26 Walkthrough on membrane models →Manual annotation
- 15:55, 12 August 2021 diff hist +138 Walkthrough on membrane models
- 15:52, 12 August 2021 diff hist +391 Walkthrough on membrane models
- 15:52, 12 August 2021 diff hist +14 Walkthrough on filament models current
- 15:47, 12 August 2021 diff hist 0 File:Membrane step 22.png Stefano Scaramuzza uploaded a new version of File:Membrane step 22.png current
- 15:45, 12 August 2021 diff hist +94 Walkthrough on membrane models
- 15:44, 12 August 2021 diff hist 0 N File:Membrane step 212.png current
- 15:44, 12 August 2021 diff hist +108 Walkthrough on membrane models
- 15:43, 12 August 2021 diff hist +837 Walkthrough on membrane models
- 15:43, 12 August 2021 diff hist 0 File:Membrane step 21.png Stefano Scaramuzza uploaded a new version of File:Membrane step 21.png current
- 15:36, 12 August 2021 diff hist +569 Walkthrough on membrane models
- 15:12, 12 August 2021 diff hist 0 File:Membrane step 16.png Stefano Scaramuzza uploaded a new version of File:Membrane step 16.png current
- 15:05, 12 August 2021 diff hist +486 Walkthrough on membrane models
- 15:02, 12 August 2021 diff hist 0 File:Membrane step 14.png Stefano Scaramuzza uploaded a new version of File:Membrane step 14.png current
- 14:56, 12 August 2021 diff hist +1,022 Walkthrough on membrane models
- 14:45, 12 August 2021 diff hist +14 Walkthrough on filament models →Generate subtomogram coordinates
- 14:43, 12 August 2021 diff hist +346 Walkthrough on membrane models
- 14:31, 12 August 2021 diff hist +43 Walkthrough on filament models
- 14:28, 12 August 2021 diff hist +1,510 Walkthrough on membrane models
- 14:19, 12 August 2021 diff hist +21 Walkthrough on filament models →Manual annotation
- 14:16, 12 August 2021 diff hist 0 File:Membrane step 3.png Stefano Scaramuzza uploaded a new version of File:Membrane step 3.png current
- 13:56, 12 August 2021 diff hist 0 N File:Membrane step 23.png current
- 13:56, 12 August 2021 diff hist 0 N File:Membrane step 22.png
- 13:55, 12 August 2021 diff hist 0 N File:Membrane step 21.png
- 13:55, 12 August 2021 diff hist 0 N File:Membrane step 20.png current
- 13:55, 12 August 2021 diff hist 0 N File:Membrane step 19.png current
- 13:55, 12 August 2021 diff hist 0 N File:Membrane step 18.png current
- 13:55, 12 August 2021 diff hist 0 N File:Membrane step 17.png current
- 13:55, 12 August 2021 diff hist 0 N File:Membrane step 16.png
- 13:54, 12 August 2021 diff hist 0 N File:Membrane step 14.png
- 13:54, 12 August 2021 diff hist 0 N File:Membrane step 13.png current
- 13:54, 12 August 2021 diff hist 0 N File:Membrane step 12.png current
- 13:54, 12 August 2021 diff hist 0 N File:Membrane step 11.png current
- 13:54, 12 August 2021 diff hist 0 N File:Membrane step 10.png current
- 13:54, 12 August 2021 diff hist 0 N File:Membrane step 9.png current
- 13:54, 12 August 2021 diff hist 0 N File:Membrane step 8.png current
- 13:54, 12 August 2021 diff hist 0 N File:Membrane step 7.png current
- 13:53, 12 August 2021 diff hist 0 N File:Membrane step 6.png current
- 13:53, 12 August 2021 diff hist 0 N File:Membrane step 5.png current
- 13:53, 12 August 2021 diff hist 0 N File:Membrane step 4.png current
- 13:53, 12 August 2021 diff hist 0 N File:Membrane step 3.png
- 13:52, 12 August 2021 diff hist 0 N File:Membrane step 2.png current
- 13:52, 12 August 2021 diff hist 0 N File:Membrane step 1.png current
- 13:51, 12 August 2021 diff hist +1,105 Walkthrough on membrane models
- 13:50, 12 August 2021 diff hist -1,105 Walkthrough on membrane models
- 13:50, 12 August 2021 diff hist +1,105 Walkthrough on membrane models
- 16:21, 11 August 2021 diff hist +592 N Walkthrough on membrane models Created page with "This walkthrough is a step-by-step guide that teaches how to extract subtomograms from structures with large surfaces (e.g., membranes) using the ''Dynamo'' surface models. =..."
- 15:14, 11 August 2021 diff hist +75 Walkthrough on filament models
- 15:03, 11 August 2021 diff hist +2 EMBO workshop 2021 →Schedule
- 15:03, 11 August 2021 diff hist -25 EMBO workshop 2021 →Schedule
- 15:02, 11 August 2021 diff hist 0 Walkthrough on filament models
- 15:00, 11 August 2021 diff hist 0 N File:Filament step 245.png current
- 14:59, 11 August 2021 diff hist +58 Walkthrough on filament models
- 14:59, 11 August 2021 diff hist 0 File:Filament step 24.png Stefano Scaramuzza uploaded a new version of File:Filament step 24.png current
- 14:58, 11 August 2021 diff hist 0 File:Filament step 25.png Stefano Scaramuzza uploaded a new version of File:Filament step 25.png current
- 14:58, 11 August 2021 diff hist +470 Walkthrough on filament models
- 14:50, 11 August 2021 diff hist 0 File:Filament step 22.png Stefano Scaramuzza uploaded a new version of File:Filament step 22.png current
- 14:44, 11 August 2021 diff hist -7 Walkthrough on filament models →Extracting tomograms
- 14:43, 11 August 2021 diff hist +1,664 Walkthrough on filament models
- 14:29, 11 August 2021 diff hist 0 File:Filament step 13.png Stefano Scaramuzza uploaded a new version of File:Filament step 13.png current
- 14:28, 11 August 2021 diff hist +696 Walkthrough on filament models
- 14:27, 11 August 2021 diff hist 0 File:Filament step 13.png Stefano Scaramuzza uploaded a new version of File:Filament step 13.png
- 14:09, 11 August 2021 diff hist +402 Walkthrough on filament models
- 14:09, 11 August 2021 diff hist 0 File:Filament step 10.png Stefano Scaramuzza uploaded a new version of File:Filament step 10.png current
- 14:08, 11 August 2021 diff hist 0 File:Filament step 8.png Stefano Scaramuzza uploaded a new version of File:Filament step 8.png current
- 14:03, 11 August 2021 diff hist 0 File:Filament step 8.png Stefano Scaramuzza uploaded a new version of File:Filament step 8.png
- 13:50, 11 August 2021 diff hist 0 File:Filament step 7.png Stefano Scaramuzza uploaded a new version of File:Filament step 7.png current
- 13:46, 11 August 2021 diff hist +737 m Walkthrough on filament models
- 13:33, 11 August 2021 diff hist 0 File:Filament step 3.png Stefano Scaramuzza uploaded a new version of File:Filament step 3.png current
- 13:24, 11 August 2021 diff hist 0 N File:Filament step 26.png current
- 13:24, 11 August 2021 diff hist 0 N File:Filament step 25.png
- 13:24, 11 August 2021 diff hist 0 N File:Filament step 24.png
- 13:24, 11 August 2021 diff hist 0 N File:Filament step 23.png current
- 13:23, 11 August 2021 diff hist 0 N File:Filament step 22.png
- 13:23, 11 August 2021 diff hist 0 N File:Filament step 21.png current
- 13:23, 11 August 2021 diff hist 0 N File:Filament step 20.png current
- 13:23, 11 August 2021 diff hist 0 N File:Filament step 19.png current
- 13:22, 11 August 2021 diff hist 0 N File:Filament step 18.png current
- 13:21, 11 August 2021 diff hist 0 N File:Filament step 17.png current
- 13:16, 11 August 2021 diff hist +478 Walkthrough on filament models
- 12:03, 11 August 2021 diff hist +347 Walkthrough on filament models
- 11:19, 11 August 2021 diff hist 0 Walkthrough on filament models
- 11:15, 11 August 2021 diff hist -2 Walkthrough on command line based tilt series alignment →Checking the results current
- 11:14, 11 August 2021 diff hist +7 Walkthrough on command line based tilt series alignment →Checking the results
- 16:48, 10 August 2021 diff hist 0 N File:Filament step 16.png current
- 16:47, 10 August 2021 diff hist 0 N File:Filament step 15.png current
- 16:47, 10 August 2021 diff hist 0 N File:Filament step 14.png current
- 16:47, 10 August 2021 diff hist 0 N File:Filament step 13.png
- 16:46, 10 August 2021 diff hist 0 N File:Filament step 12.png current
- 16:46, 10 August 2021 diff hist 0 N File:Filament step 11.png current
- 16:44, 10 August 2021 diff hist 0 N File:Filament step 10.png
- 16:43, 10 August 2021 diff hist 0 N File:Filament step 9.png current
- 16:32, 10 August 2021 diff hist 0 N File:Filament step 8.png
- 16:29, 10 August 2021 diff hist 0 N File:Filament step 7.png
- 16:29, 10 August 2021 diff hist 0 N File:Filament step 6.png current
- 15:44, 10 August 2021 diff hist 0 N File:Filament step 5.png current
- 15:43, 10 August 2021 diff hist 0 N File:Filament step 4.png current
- 15:42, 10 August 2021 diff hist 0 N File:Filament step 3.png
- 15:42, 10 August 2021 diff hist 0 N File:Filament step 2.png current
- 15:42, 10 August 2021 diff hist -56 Walkthrough on filament models
- 15:41, 10 August 2021 diff hist +846 Walkthrough on filament models
- 15:40, 10 August 2021 diff hist -791 Walkthrough on filament models →Data
- 15:40, 10 August 2021 diff hist +791 Walkthrough on filament models →Data
- 15:38, 10 August 2021 diff hist +50 Walkthrough on filament models →Data
- 15:37, 10 August 2021 diff hist 0 N File:Filament step 1.png current
- 15:36, 10 August 2021 diff hist -39 Walkthrough on filament models
- 15:34, 10 August 2021 diff hist -6 m EMBO workshop 2021 →Time schedule
- 12:01, 10 August 2021 diff hist +26 Walkthrough on filament models
- 12:01, 10 August 2021 diff hist +752 N Walkthrough on filament models Created page with "This walkthrough is a step-by-step guide that teaches how to extract subtomograms along filament-like structures using the ''Dynamo'' filament models. We are going to demons..."
- 10:39, 10 August 2021 diff hist +27 EMBO workshop 2021 →Load and run Dynamo
- 10:38, 10 August 2021 diff hist -2 Walkthrough on command line based tilt series alignment
- 10:37, 10 August 2021 diff hist +91 Walkthrough on command line based tilt series alignment
- 10:30, 10 August 2021 diff hist +92 EMBO workshop 2021 →Time schedule
- 10:16, 10 August 2021 diff hist -3,301 EMBO workshop 2021
- 10:01, 10 August 2021 diff hist +713 EMBO workshop 2021
- 20:48, 9 August 2021 diff hist -31 EMBO workshop 2021 →Time schedule
- 11:22, 6 August 2021 diff hist +20 EMBO workshop 2021 →Data location
- 11:16, 6 August 2021 diff hist -40 EMBO workshop 2021 →Time schedule
- 11:16, 6 August 2021 diff hist +12 EMBO workshop 2021 →Time schedule
- 11:15, 6 August 2021 diff hist -10 EMBO workshop 2021 →Data location
- 11:12, 6 August 2021 diff hist 0 N File:Embo files.png current
- 11:12, 6 August 2021 diff hist +257 EMBO workshop 2021
- 11:07, 6 August 2021 diff hist -179 EMBO workshop 2021 →Data location
- 10:22, 6 August 2021 diff hist +94 EMBO workshop 2021
- 23:05, 5 August 2021 diff hist +8 Walkthrough on GUI based tilt series alignment →GUI description current
- 22:46, 5 August 2021 diff hist +2 Walkthrough on GUI based tilt series alignment →Visualization matrix
- 22:45, 5 August 2021 diff hist +1 m Walkthrough on GUI based tilt series alignment →GUI description
- 22:44, 5 August 2021 diff hist +52 Walkthrough on GUI based tilt series alignment →Processing
- 22:40, 5 August 2021 diff hist +111 Walkthrough on GUI based tilt series alignment
- 22:38, 5 August 2021 diff hist 0 File:OpenOriginalTiltSeriesDataGUI.png Stefano Scaramuzza uploaded a new version of File:OpenOriginalTiltSeriesDataGUI.png current
- 22:37, 5 August 2021 diff hist -115 Walkthrough on GUI based tilt series alignment →Visualization matrix
- 20:23, 5 August 2021 diff hist -39 Walkthrough on GUI based tilt series alignment →GUI description
- 18:14, 5 August 2021 diff hist -58 Walkthrough on GUI based tilt series alignment →GUI description
- 18:13, 5 August 2021 diff hist +64 Walkthrough on GUI based tilt series alignment
- 18:12, 5 August 2021 diff hist -201 Walkthrough on GUI based tilt series alignment →GUI description
- 18:03, 5 August 2021 diff hist -14 Walkthrough on GUI based tilt series alignment →GUI description
- 17:51, 5 August 2021 diff hist -413 Walkthrough on GUI based tilt series alignment
- 17:18, 5 August 2021 diff hist -90 Walkthrough on GUI based tilt series alignment →GUI description
- 17:14, 5 August 2021 diff hist -1 Walkthrough on GUI based tilt series alignment →Data
- 17:13, 5 August 2021 diff hist +30 Walkthrough on GUI based tilt series alignment →Creating an alignment workflow
- 17:13, 5 August 2021 diff hist +37 Walkthrough on GUI based tilt series alignment
- 17:12, 5 August 2021 diff hist -530 Walkthrough on GUI based tilt series alignment →Creating an alignment workflow
- 17:06, 5 August 2021 diff hist -557 Walkthrough on GUI based tilt series alignment →Alignment GUI Controls
- 16:40, 5 August 2021 diff hist +524 Walkthrough on command line based tilt series alignment →Define coordinates in the binned tomogram
- 16:24, 5 August 2021 diff hist 0 File:AlignCommandLine dtmsliceOfBinnedReconstruction.png Stefano Scaramuzza uploaded a new version of File:AlignCommandLine dtmsliceOfBinnedReconstruction.png current
- 16:22, 5 August 2021 diff hist +21 Walkthrough on command line based tilt series alignment →On the fly reconstruction of particles
- 16:12, 5 August 2021 diff hist -51 EMBO workshop 2021
- 16:12, 5 August 2021 diff hist -79 Walkthrough on command line based tilt series alignment →Checking the results
- 16:04, 5 August 2021 diff hist -24 Walkthrough on command line based tilt series alignment →Reconstruct particles on the fly
- 16:03, 5 August 2021 diff hist 0 Walkthrough on command line based tilt series alignment →Reconstruct particles on the fly
- 15:54, 5 August 2021 diff hist 0 Walkthrough on command line based tilt series alignment →Reconstruct particles on the fly
- 15:54, 5 August 2021 diff hist +1 Walkthrough on command line based tilt series alignment →Reconstruct particles on the fly
- 15:54, 5 August 2021 diff hist -9 Walkthrough on command line based tilt series alignment →Cropping the gold bead particles
- 15:44, 5 August 2021 diff hist +2 Walkthrough on command line based tilt series alignment →Grep coordinates in the binned tomogram
- 15:37, 5 August 2021 diff hist +1 Walkthrough on command line based tilt series alignment →Grep coordinates in the binned tomogram
- 15:33, 5 August 2021 diff hist +51 EMBO workshop 2021 →Automated alignment of tilt series through the command line
- 15:31, 5 August 2021 diff hist +79 Walkthrough on command line based tilt series alignment →Running the workflow
- 15:29, 5 August 2021 diff hist +40 Walkthrough on command line based tilt series alignment →Checking the results
- 15:12, 5 August 2021 diff hist -86 Walkthrough on command line based tilt series alignment →Basic data
- 15:11, 5 August 2021 diff hist -1 Walkthrough on command line based tilt series alignment →Basic data
- 15:06, 5 August 2021 diff hist -10 Walkthrough on command line based tilt series alignment →On the fly reconstruction of particles
- 15:02, 5 August 2021 diff hist -125 Walkthrough on GUI based tilt series alignment →Detection of gold beads
- 14:29, 5 August 2021 diff hist -45 Walkthrough on command line based tilt series alignment →Checking the results
- 14:27, 5 August 2021 diff hist -19 Walkthrough on command line based tilt series alignment →Checking the results
- 14:15, 5 August 2021 diff hist +9 Walkthrough on command line based tilt series alignment →Checking the results
- 14:01, 5 August 2021 diff hist +52 Walkthrough on command line based tilt series alignment →Running the workflow
- 13:59, 5 August 2021 diff hist +98 Walkthrough on command line based tilt series alignment →Changing generic parameters
- 12:31, 5 August 2021 diff hist -135 Walkthrough on command line based tilt series alignment →Detection settings
- 12:28, 5 August 2021 diff hist +113 m Walkthrough on command line based tilt series alignment
- 12:27, 5 August 2021 diff hist +1 Walkthrough on command line based tilt series alignment →Computation settings
- 12:25, 5 August 2021 diff hist -1 Walkthrough on command line based tilt series alignment →Computation settings
- 12:24, 5 August 2021 diff hist +28 Walkthrough on command line based tilt series alignment →Entering the data
- 12:22, 5 August 2021 diff hist +89 Walkthrough on command line based tilt series alignment →Entering the data
- 12:08, 5 August 2021 diff hist 0 EMBO workshop 2021 →Contents
- 12:07, 5 August 2021 diff hist -2 EMBO workshop 2021 →Time schedule
- 11:50, 5 August 2021 diff hist -4 EMBO workshop 2021 →Time schedule
- 11:49, 5 August 2021 diff hist -182 EMBO workshop 2021 →Dynamic of the course
- 11:44, 5 August 2021 diff hist +152 m EMBO workshop 2021 →Opening Dynamo
- 11:38, 5 August 2021 diff hist -3 m EMBO workshop 2021
- 18:18, 4 August 2021 diff hist -11 Walkthrough on command line based tilt series alignment →Detection settings
- 18:00, 4 August 2021 diff hist +13 m Walkthrough on command line based tilt series alignment →Acquisition settings
- 17:59, 4 August 2021 diff hist +52 Walkthrough on command line based tilt series alignment →Basic data
- 17:58, 4 August 2021 diff hist +56 Walkthrough on command line based tilt series alignment →Basic data
- 17:56, 4 August 2021 diff hist +6 m Walkthrough on command line based tilt series alignment →Basic data
- 17:55, 4 August 2021 diff hist +4 Walkthrough on command line based tilt series alignment →Basic data
- 17:55, 4 August 2021 diff hist +296 Walkthrough on command line based tilt series alignment →Basic data
- 17:51, 4 August 2021 diff hist +125 Walkthrough on command line based tilt series alignment
- 17:46, 4 August 2021 diff hist -120 Walkthrough on command line based tilt series alignment →Entering the data
- 17:45, 4 August 2021 diff hist 0 File:AlignCommandLine autocompletionOfUserObject.png Stefano Scaramuzza uploaded a new version of File:AlignCommandLine autocompletionOfUserObject.png current
- 17:45, 4 August 2021 diff hist +275 Walkthrough on command line based tilt series alignment
- 15:36, 4 August 2021 diff hist +3 Walkthrough on command line based tilt series alignment →Create the workflow
- 15:27, 4 August 2021 diff hist +69 Walkthrough on command line based tilt series alignment
- 15:27, 4 August 2021 diff hist +71 EMBO workshop 2021 →Opening Dynamo
- 11:59, 4 August 2021 diff hist -191 Walkthrough on GUI based tilt series alignment
- 11:56, 4 August 2021 diff hist +25 Walkthrough on command line based tilt series alignment
- 11:55, 4 August 2021 diff hist +401 EMBO workshop 2021 →Alignment of tilt series
- 11:11, 4 August 2021 diff hist +29 Walkthrough on GUI based tilt series alignment
- 11:11, 4 August 2021 diff hist +198 Walkthrough on command line based tilt series alignment
- 17:56, 3 August 2021 diff hist 0 Walkthrough on GUI based tilt series alignment →Full sized reconstruction
- 17:55, 3 August 2021 diff hist 0 Walkthrough on GUI based tilt series alignment →Binned reconstruction
- 17:54, 3 August 2021 diff hist 0 File:AlignGUI theFullSizeReconstructionIncludesOnlyTheObjectOfInterest.png Stefano Scaramuzza uploaded a new version of File:AlignGUI theFullSizeReconstructionIncludesOnlyTheObjectOfInterest.png current
- 17:54, 3 August 2021 diff hist -182 Walkthrough on GUI based tilt series alignment →Full sized reconstruction
- 17:49, 3 August 2021 diff hist 0 File:AlignGUI asAnSpecificViewerIsNotAvailableForThisStepWeCanUseTheToolboxOfTheStepsItems.png Stefano Scaramuzza uploaded a new version of File:AlignGUI asAnSpecificViewerIsNotAvailableForThisStepWeCanUseTheToolboxOfTheStepsItems.png current
- 17:49, 3 August 2021 diff hist -351 Walkthrough on GUI based tilt series alignment →Full sized reconstruction
- 17:46, 3 August 2021 diff hist -91 Walkthrough on GUI based tilt series alignment →Binned reconstruction
- 17:44, 3 August 2021 diff hist +485 Walkthrough on GUI based tilt series alignment →Full sized reconstruction
- 16:51, 3 August 2021 diff hist 0 File:AlignGUI weCheckTheDistanceOfTheObjectOfInterest.png Stefano Scaramuzza uploaded a new version of File:AlignGUI weCheckTheDistanceOfTheObjectOfInterest.png current
- 16:50, 3 August 2021 diff hist -79 Walkthrough on GUI based tilt series alignment →Full sized reconstruction
- 16:39, 3 August 2021 diff hist 0 File:AlignGUI thePinToolIsUsefulForLocatingIsolatedPoints.png Stefano Scaramuzza uploaded a new version of File:AlignGUI thePinToolIsUsefulForLocatingIsolatedPoints.png current
- 16:37, 3 August 2021 diff hist +49 Walkthrough on GUI based tilt series alignment →Full sized reconstruction
- 16:36, 3 August 2021 diff hist 0 File:AlignGUI thePinToolIsUsefulForLocatingIsolatedPoints.png Stefano Scaramuzza uploaded a new version of File:AlignGUI thePinToolIsUsefulForLocatingIsolatedPoints.png
- 16:35, 3 August 2021 diff hist +12 Walkthrough on GUI based tilt series alignment →Full sized reconstruction
- 16:26, 3 August 2021 diff hist +478 Walkthrough on GUI based tilt series alignment →Reconstruction
- 16:18, 3 August 2021 diff hist 0 File:AlignGUI binnedWeightedBackProjectionReconstruction.png Stefano Scaramuzza uploaded a new version of File:AlignGUI binnedWeightedBackProjectionReconstruction.png current
- 16:17, 3 August 2021 diff hist 0 File:AlignGUI chooseAVisualization.png Stefano Scaramuzza uploaded a new version of File:AlignGUI chooseAVisualization.png current
- 16:16, 3 August 2021 diff hist 0 File:AlignGUI reconstructionArea.png Stefano Scaramuzza uploaded a new version of File:AlignGUI reconstructionArea.png current
- 16:12, 3 August 2021 diff hist +14 Walkthrough on GUI based tilt series alignment →Alignment
- 15:55, 3 August 2021 diff hist +6 Walkthrough on GUI based tilt series alignment →Full sized reconstruction
- 15:53, 3 August 2021 diff hist -18 Walkthrough on GUI based tilt series alignment →Full sized reconstruction
- 15:50, 3 August 2021 diff hist +6 Walkthrough on GUI based tilt series alignment →Detection of gold beads
- 15:50, 3 August 2021 diff hist -28 Walkthrough on GUI based tilt series alignment →CTF
- 15:49, 3 August 2021 diff hist +202 Walkthrough on GUI based tilt series alignment →Align the tilt series
- 15:47, 3 August 2021 diff hist +188 Walkthrough on GUI based tilt series alignment →Alignment
- 15:28, 3 August 2021 diff hist +264 Walkthrough on GUI based tilt series alignment →Refinement
- 15:12, 3 August 2021 diff hist 0 File:AlignGUI allStepsOfRefinementAreaAreBeingComputed.png Stefano Scaramuzza uploaded a new version of File:AlignGUI allStepsOfRefinementAreaAreBeingComputed.png current
- 15:04, 3 August 2021 diff hist +4 Walkthrough on GUI based tilt series alignment →Trail extension
- 15:01, 3 August 2021 diff hist +138 Walkthrough on GUI based tilt series alignment →Tilt gap filling
- 14:51, 3 August 2021 diff hist +15 Walkthrough on GUI based tilt series alignment →Tilt gap filling
- 14:45, 3 August 2021 diff hist +2 Walkthrough on GUI based tilt series alignment →Tilt gap filling
- 14:40, 3 August 2021 diff hist +47 Walkthrough on GUI based tilt series alignment →Iterative reindexing
- 14:39, 3 August 2021 diff hist -15 Walkthrough on GUI based tilt series alignment →Keep long chains
- 14:33, 3 August 2021 diff hist -6 Walkthrough on GUI based tilt series alignment →Iterative reindexing
- 14:15, 3 August 2021 diff hist +73 Walkthrough on GUI based tilt series alignment →Iterative reindexing
- 14:13, 3 August 2021 diff hist +21 Walkthrough on GUI based tilt series alignment →Selection of stable trails
- 13:58, 3 August 2021 diff hist -26 Walkthrough on GUI based tilt series alignment →Rough Alignment
- 12:23, 3 August 2021 diff hist +170 Walkthrough on GUI based tilt series alignment →Indexing
- 12:05, 3 August 2021 diff hist -42 Walkthrough on GUI based tilt series alignment
- 12:00, 3 August 2021 diff hist +35 Walkthrough on GUI based tilt series alignment
- 11:45, 3 August 2021 diff hist -104 Walkthrough on GUI based tilt series alignment
- 11:45, 3 August 2021 diff hist 0 File:AlignGUI toolboxOptionForTestingTheParametersOnACentralImage.png Stefano Scaramuzza uploaded a new version of File:AlignGUI toolboxOptionForTestingTheParametersOnACentralImage.png current
- 11:36, 3 August 2021 diff hist -389 Walkthrough on GUI based tilt series alignment
- 11:34, 3 August 2021 diff hist 0 File:AlignGUI DetectionParameters.png Stefano Scaramuzza uploaded a new version of File:AlignGUI DetectionParameters.png current
- 11:20, 3 August 2021 diff hist -141 Walkthrough on GUI based tilt series alignment
- 11:05, 3 August 2021 diff hist 0 File:OriginalGoldBeadDiameter.png Stefano Scaramuzza uploaded a new version of File:OriginalGoldBeadDiameter.png current
- 14:49, 2 August 2021 diff hist +33 Walkthrough on GUI based tilt series alignment
- 18:12, 30 July 2021 diff hist +136 Walkthrough on GUI based tilt series alignment
- 18:03, 30 July 2021 diff hist 0 File:AlignGUI inputWorkflowParameters.png Stefano Scaramuzza uploaded a new version of File:AlignGUI inputWorkflowParameters.png current
- 17:58, 30 July 2021 diff hist -284 Walkthrough on GUI based tilt series alignment
- 17:27, 28 July 2021 diff hist -150 m EMBO workshop 2021
- 11:35, 28 July 2021 diff hist +337 m EMBO workshop 2021
- 09:13, 14 July 2021 diff hist -1 EMBO workshop 2021
- 08:52, 14 July 2021 diff hist +354 EMBO workshop 2021
- 19:20, 13 July 2021 diff hist -30 Walkthrough on command line based tilt series alignment
- 19:10, 13 July 2021 diff hist +1 Walkthrough on manual marker clicking current
- 14:45, 13 July 2021 diff hist -309 m Walkthrough on manual marker clicking
- 13:57, 13 July 2021 diff hist -83 m Walkthrough on manual marker clicking
- 09:51, 13 July 2021 diff hist -2 EMBO workshop 2021
- 09:50, 13 July 2021 diff hist +2 m EMBO workshop 2021
- 18:20, 27 August 2019 diff hist +518 Walkthrough on manual marker clicking
- 18:02, 27 August 2019 diff hist -1 Walkthrough on manual marker clicking
- 17:29, 27 August 2019 diff hist -2 m Walkthrough on manual marker clicking
- 17:23, 27 August 2019 diff hist -2 m Walkthrough on manual marker clicking
- 17:23, 27 August 2019 diff hist +2 m Walkthrough on manual marker clicking
- 17:23, 27 August 2019 diff hist +110 m Walkthrough on manual marker clicking
- 11:51, 27 August 2019 diff hist +96 m GPUs Basel 2019 current
- 11:40, 27 August 2019 diff hist 0 m GPUs Basel 2019
- 11:38, 27 August 2019 diff hist -89 m GPUs Basel 2019
- 08:37, 27 August 2019 diff hist 0 m GPUs Basel 2019
- 18:24, 26 August 2019 diff hist +13 m GPUs Basel 2019
- 18:22, 26 August 2019 diff hist +140 m GPUs Basel 2019
- 17:14, 26 August 2019 diff hist +43 m GPUs Basel 2019
- 16:57, 26 August 2019 diff hist +93 m GPUs Basel 2019
- 10:52, 26 August 2019 diff hist +4,298 N GPUs Basel 2019 Created page with "Here we describe how to use the GPUs provided for the Basel Workshop 2018. We go through each step and use a simple tutorial dataset and project as an example. You can use the..."
- 16:05, 23 August 2019 diff hist 0 File:Defocus left right.png Stefano Scaramuzza uploaded a new version of File:Defocus left right.png current
- 14:59, 30 April 2019 diff hist 0 Practical Suggestions for Tomographic Reconstruction current
- 10:33, 29 April 2019 diff hist +1,395 Practical Suggestions for Tomographic Reconstruction
- 17:23, 15 April 2019 diff hist -3 m Getting a Structure from Multiple Tomograms of HIV Capsids (walkthrough)
- 14:04, 15 April 2019 diff hist +137 m Getting a Structure from Multiple Tomograms of HIV Capsids (walkthrough)
- 13:36, 15 April 2019 diff hist +212 Getting a Structure from Multiple Tomograms of HIV Capsids (walkthrough)
- 09:16, 12 April 2019 diff hist +212 Getting a Structure from Multiple Tomograms of HIV Capsids (walkthrough)
- 14:21, 10 April 2019 diff hist +155 Angle of astigmatism convention current
- 14:19, 10 April 2019 diff hist +112 Practical Suggestions for Tomographic Reconstruction
- 14:34, 9 April 2019 diff hist +14 Considerations for tomogram positioning in IMOD current
- 14:33, 9 April 2019 diff hist +4 m Considerations for tomogram positioning in IMOD
- 17:30, 8 April 2019 diff hist 0 Considerations for tomogram positioning in IMOD
- 17:27, 8 April 2019 diff hist +827 Considerations for tomogram positioning in IMOD
- 16:55, 8 April 2019 diff hist +142 Practical Suggestions for Tomographic Reconstruction
- 15:39, 8 April 2019 diff hist +310 Considerations for tomogram positioning in IMOD
- 17:54, 5 April 2019 diff hist 0 N File:Data organisation dynamo.jpg current
- 17:51, 5 April 2019 diff hist +3,961 N Practical Suggestions for Tomographic Reconstruction Created page with "This article contains some practical suggestions and examples for the pre-processing of tomographic tilt series and the reconstruction of tomograms. Be aware that there exist..."
- 17:28, 5 April 2019 diff hist +119 Tilt angle convention
- 11:57, 27 March 2019 diff hist 0 Considerations for tilt series alignment in IMOD →Residual fixing current
- 18:19, 26 March 2019 diff hist +38 Considerations for tilt series alignment in IMOD
- 18:14, 26 March 2019 diff hist 0 File:Imod residuals.jpg Stefano Scaramuzza uploaded a new version of File:Imod residuals.jpg current
- 18:06, 26 March 2019 diff hist 0 N File:Imod residuals.jpg
- 18:06, 26 March 2019 diff hist +93 Considerations for tilt series alignment in IMOD
- 15:03, 11 March 2019 diff hist +188 Considerations for tilt series alignment in IMOD
- 14:01, 26 February 2019 diff hist +266 Considerations for tilt series alignment in IMOD →Residual fixing
- 17:42, 1 February 2019 diff hist +393 Tilt angle convention
- 15:52, 31 January 2019 diff hist +90 Angle of astigmatism convention
- 15:45, 31 January 2019 diff hist +154 Considerations for tomogram positioning in IMOD
- 15:34, 31 January 2019 diff hist +53 Tomogram quality assessment current
- 15:34, 31 January 2019 diff hist +22 Tomogram quality assessment
- 15:30, 31 January 2019 diff hist +10 Considerations for tilt series alignment in IMOD
- 15:23, 31 January 2019 diff hist +9 Tilt angle convention
- 18:02, 30 January 2019 diff hist 0 Angle of astigmatism convention
- 17:59, 30 January 2019 diff hist +1 Angle of astigmatism convention
- 17:59, 30 January 2019 diff hist +739 N Angle of astigmatism convention Created page with "The angle of astigmatism as is it is defined in [https://bio3d.colorado.edu/imod/ IMOD] and [https://github.com/turonova/novaCTF/wiki novaCTF] differes from the convention use..."
- 17:56, 30 January 2019 diff hist 0 N File:Astigmatism conventions.jpg current
- 17:44, 30 January 2019 diff hist +2,522 N Considerations for tomogram positioning in IMOD Created page with "During tomogram reconstruction in [https://bio3d.colorado.edu/imod/ IMOD] at some point the dimensions of the final tomogram are calculated in the "tomogram positioning" step...."
- 17:29, 30 January 2019 diff hist 0 N File:Tomopitch limits.jpg current
- 16:43, 30 January 2019 diff hist 0 N File:Tomogram thickness.jpg current
- 16:31, 30 January 2019 diff hist 0 N File:Tomopitch parameters.png current
- 16:04, 30 January 2019 diff hist +782 Tomogram quality assessment
- 15:50, 30 January 2019 diff hist 0 File:Imod alignment parameters.png Stefano Scaramuzza uploaded a new version of File:Imod alignment parameters.png current
- 15:24, 30 January 2019 diff hist +479 N Tomogram quality assessment Created page with "To visually asses the quality of a final tomogram reconstruction, we recommend to look closely at the gold beads in the volume. A good tilt series alignment and therefore good..."
- 15:23, 30 January 2019 diff hist 0 N File:Gold beads quality.jpg current
- 15:12, 30 January 2019 diff hist +201 Considerations for tilt series alignment in IMOD
- 15:09, 30 January 2019 diff hist 0 N File:Imod red box.png current
- 15:05, 30 January 2019 diff hist 0 Considerations for tilt series alignment in IMOD
- 15:05, 30 January 2019 diff hist 0 N File:Imod alignment parameters.png
- 14:48, 30 January 2019 diff hist +2,145 N Considerations for tilt series alignment in IMOD Created page with "When doing the tilt series alignment in [https://bio3d.colorado.edu/imod/ IMOD] there are a few things we strongly recommend to follow in order to reach the best possible resu..."
- 14:19, 30 January 2019 diff hist +133 Getting a Structure from Multiple Tomograms of HIV Capsids (walkthrough)
- 14:14, 30 January 2019 diff hist +176 Getting a Structure from Multiple Tomograms of HIV Capsids
- 11:06, 30 January 2019 diff hist +152 Tilt angle convention
- 16:34, 29 January 2019 diff hist +70 Tilt angle convention
- 16:29, 29 January 2019 diff hist +25 Tilt angle convention
- 16:28, 29 January 2019 diff hist 0 m Tilt angle convention Stefano Scaramuzza moved page Tilt angle conventions to Tilt angle convention without leaving a redirect
- 16:26, 29 January 2019 diff hist +495 Tilt angle convention
- 16:01, 29 January 2019 diff hist 0 N File:Defocus left right.png
- 16:01, 29 January 2019 diff hist +1,083 N Tilt angle convention Created page with "By default, Dynamo, [https://bio3d.colorado.edu/imod/ IMOD] and [https://github.com/turonova/novaCTF/wiki novaCTF] all use the same convention for the sign of the tilt angle o..."
- 09:48, 8 September 2018 diff hist +216 Main Page
- 21:40, 5 September 2018 diff hist -17 Getting a Structure from Multiple Tomograms of HIV Capsids (walkthrough) →Extract subvolumes
- 10:32, 5 September 2018 diff hist -2 Advanced starters guide →Creating a tight mask
- 08:01, 5 September 2018 diff hist +20 EMBO workshop 2018 →Data sets current
- 07:56, 5 September 2018 diff hist +82 EMBO workshop 2018 →Instructors
- 16:44, 4 September 2018 diff hist +330 Getting a Structure from Multiple Tomograms of HIV Capsids (walkthrough)
- 16:35, 4 September 2018 diff hist +284 Getting a Structure from Multiple Tomograms of HIV Capsids (walkthrough)
- 16:33, 4 September 2018 diff hist 0 N File:VLP ali mask x.png current
- 16:15, 4 September 2018 diff hist +221 Getting a Structure from Multiple Tomograms of HIV Capsids (walkthrough)
- 16:07, 4 September 2018 diff hist +89 Getting a Structure from Multiple Tomograms of HIV Capsids (walkthrough)
- 15:45, 4 September 2018 diff hist 0 File:VLP template.png Stefano Scaramuzza uploaded a new version of File:VLP template.png current
