Difference between revisions of "Montage viewer for membrane picking"

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Here an example of use of the montage viewer for membrane models through the tomogram browser [[dtmslice]] is presented.
 
Here an example of use of the montage viewer for membrane models through the tomogram browser [[dtmslice]] is presented.
  
[[File:MontageMembranesTomogram.png|thumb|center|500px| XXXX ]]
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[[File:MontageMembranesTomogram.png|thumb|center|500px| [[dtmslice]] view of a tomogram with several liposomes ]]
  
[[File:MontageMembranesMenu.png|thumb|center|500px| XXXX ]]
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[[File:MontageMembranesMenu.png|thumb|center|500px| Opening the Montage viewer for the full scene]]
  
[[File:MontageMembranesMontage.png|thumb|center|500px| XXXX ]]
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[[File:MontageMembranesMontage.png|thumb|center|500px| Montage view of the full [[dtmslice]] scene ]]
  
[[File:MontageMembranesCreateModel.png|thumb|center|500px| XXXX ]]
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[[File:MontageMembranesCreateModel.png|thumb|center|500px| Creation of a membrane model (called ''Surface'' in this menu)  ]]
  
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[[File:MontageMembranesLocateFirstGlobal.png|thumb|center|500px| We select one liposome for track across levels ]]
  
[[File:MontageMembranesLocateFirstGlobal.png|thumb|center|500px| XXXX ]]
 
  
[[File:.png|thumb|center|500px| XXXX ]]
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[[File:MontageMembranesLocateFirstLocal.png|thumb|center|500px| Zoom in a region of interest. ]]
 
[[File:MontageMembranesClicker.png|thumb|center|500px| The clicking status must be active in order to proceed with the clicking ]]
 
[[File:MontageMembranesClicker.png|thumb|center|500px| The clicking status must be active in order to proceed with the clicking ]]
  
 
After activating the clicker, you can (main) click on a level of the montage.  
 
After activating the clicker, you can (main) click on a level of the montage.  
  
[[File:MontageMembranesLocateFirstLocal.png|thumb|center|500px| XXXX ]]
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[[File:MontageMembranesZoomedFirstSelection.png|thumb|center|500px| Membrane points clicked on the selected ''z'' level ]]
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[[File:MontageMembranesLocateFirstScene.png|thumb|center|500px| XXXX ]]
 
[[File:MontageMembranesLocateFirstScene.png|thumb|center|500px| XXXX ]]

Revision as of 19:18, 27 February 2017

Here an example of use of the montage viewer for membrane models through the tomogram browser dtmslice is presented.

dtmslice view of a tomogram with several liposomes
Opening the Montage viewer for the full scene
Montage view of the full dtmslice scene
Creation of a membrane model (called Surface in this menu)
We select one liposome for track across levels


Zoom in a region of interest.
The clicking status must be active in order to proceed with the clicking

After activating the clicker, you can (main) click on a level of the montage.

Membrane points clicked on the selected z level


XXXX
XXXX
Icon in the toolbar for full zoom out

[[File:MontageMembranesZoomOutAfterFirst.png|thumb|center|500px| Full view]