Materials Basel 2016

Theory will be presented on synthetic data generated on the fly by Dynamo. Then, the shown theory can be applied on real data sets brought by the participants themselves, or the data sets prepared in the instructor file share under: /Users/gast/mountedData/workshop2016

Program

General Introduction

Wednesday afternoon.

• Basic Dynamo jargon

• tutorial on basic elements: help, data and metadata formats.
• tutorial on the basic concept in Dynamo alignment: the project.

after the coffee break:

• Basic walkthrough: creating a catalogue, picking particles, launching a project.
• Further work:
  • tutorial on the use command line operations for general purposes.
  • tutorial on the use of the command line to manage projects.

Data management and modeling

Thursday morning.

• tutorial on membrane modeling with dmslice
• Filament models with dtmslice
  • tutorial
  • walkthrough
• Further work: catalogue

Classification

Thursday afternoon session.

• PCA
• Multirefererence Analysis walkthrough
• Further work
  • Commandline operations with PCA

suggested data sets

5HT3 particles

Additional tools

Friday morning session.

• Subboxing tutorial
• Manual alignment.
• Exercises