Difference between revisions of "Main Page"

From Dynamo
Jump to navigation Jump to search
 
(23 intermediate revisions by 2 users not shown)
Line 1: Line 1:
{{DISPLAYTITLE:Dynamo}}
+
{{DISPLAYTITLE:''Dynamo''}}
  
<strong>Wiki is  under construction!!!</strong>
+
This website is no longer in use. Please visit our [https://www.dynamo-em.org//w/index.php?title=Main_Page new site] at the Biofisika Institute.
 
 
''Dynamo'' is a software environment for subtomogram averaging of cryo-EM data.
 
 
 
This wiki guides ''Dynamo'' users all the way from tomograms to averages and classes. In a full workflow, you would  organize tomograms in [[Catalogue | catalogues]], use them to  [[Particle picking|pick particles]], then create [[Subtomogram alignment|alignment projects]], or even  [[Classification | classification projects]].
 
 
 
You don't need to perform the full workflow with ''Dynamo''. ''Dynamo'' is very modular, and with a basic understanding of the [[formats]] of each of those stages, you can jump to the module that carries the analysis part of your interest.
 
 
 
For downloads of the software, please use our older website [http://www.dynamo-em.org] instead. This will require logging in.
 
 
 
Please cite this paper if ''Dynamo'' is useful in your research:
 
[http://www.sciencedirect.com/science/article/pii/S1047847711003650|''Dynamo: A flexible, user-friendly development tool for subtomogram averaging of cryo-EM data in high-performance computing environments.''] Castaño-Díez D, Kudryashev M, Arheit M, Stahlberg H., J Struct Biol. 2012 Jan 8.
 
 
 
 
 
== About this wiki==
 
 
 
Whenever you see the mark T.B.I. : ''to be implemented''. If you see this mark on any described functionality, this means that this is probably not in your ''Dynamo'' version, but is under development on our side. If the described functionality might be of interest for you, this might be a good moment to contact us to describe how you would use it, so that we can try to design the tool in a compatible way.
 

Latest revision as of 12:31, 15 September 2023


This website is no longer in use. Please visit our new site at the Biofisika Institute.