Difference between revisions of "Getting started"

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If you want a plunge-freeze immersion in ''Dynamo'' from scratch , you can start by following the [[Starters guide| starters guide]]. This is a short hands-on complete walkthrough through the main functionalities in ''Dynamo'': [[Viewing tomograms|viewing]] and [[Catalogue|organizing]] tomograms, [[Particle extraction|extracting particles]], [[Subtomogram alignment|aligning]], averaging and [[Classification|classifying]] subtomograms, and [[Adaptive bandpass filtering|avoiding overfitting]].
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== Starters guide ==
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If you want a plunge-freeze immersion in ''Dynamo'' from scratch, you can start by following the [[Starters guide| starters guide]]. This is a short hands-on complete walkthrough through the main functionalities in ''Dynamo'': [[Viewing tomograms|viewing]] and [[Catalogue|organizing]] tomograms, [[Particle extraction|extracting particles]], [[Subtomogram alignment|aligning]], averaging and [[Classification|classifying]] subtomograms, and [[Adaptive bandpass filtering|avoiding overfitting]].
  
Otherwise you may take a look on the diverse ways of [[Getting help]] in ''Dynamo'', or look on the tutorials defined for specific tasks.
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== Tutorials ==
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There are several [[pdf tutorials|tutorials]] defined for specific tasks. Some of of them address basic aspects:
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* This {{pdftutorial|introduction1AlignmentProjects|tutorial}} walks you through the creation of an alignment project with synthetic subtomograms (skipping the particle creation part).
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* This {{pdftutorial|introduction2TablesAndData|tutorial}} shows you some basic formats (as tables and data) and teaches you basic manipulations.
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== Video Tutorials ==
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We intend to keep a regularly updated set of [[video tutorials]] covering basic aspects of ''Dynamo''.
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== Getting help ==
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''Dynamo'' offers several ways of [[Getting help|getting help]] on specific subjects.... and of course, you can always [mailto:daniel.castano@unibas.ch contact us]

Latest revision as of 09:35, 2 June 2016

Starters guide

If you want a plunge-freeze immersion in Dynamo from scratch, you can start by following the starters guide. This is a short hands-on complete walkthrough through the main functionalities in Dynamo: viewing and organizing tomograms, extracting particles, aligning, averaging and classifying subtomograms, and avoiding overfitting.

Tutorials

There are several tutorials defined for specific tasks. Some of of them address basic aspects:

  • This tutorial walks you through the creation of an alignment project with synthetic subtomograms (skipping the particle creation part).
  • This tutorial shows you some basic formats (as tables and data) and teaches you basic manipulations.

Video Tutorials

We intend to keep a regularly updated set of video tutorials covering basic aspects of Dynamo.

Getting help

Dynamo offers several ways of getting help on specific subjects.... and of course, you can always contact us