Daverage

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daverage is the basic command line option for averaging particles in a data folder using alignment parameters expresed inside a table.


Syntax

The basic syntax of the command is:

 output = daverage('myData','t','myTable.tbl');

where output is an structure recording several items (including of course the density map). If you want to use a linux-like notation, you can produce a left-hand-side output wuth the flag ws (short for workspace), i.e.


daverage myData -t myTable.tbl -ws output

Input

Data folder

The location of the particles can be passed through:

Table

A regular Dynamo table, than can be passed as file or numeric matrix.

Options

Output

The output structure has several fields.


Averaging procedure

Rotation and shift

Normalization

NaN compensation

Missing wedge compensation